Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6810

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191872 to 193044 15177 mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193397 to 194230 15178 mRNA_6811: 15179 - K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9, at 194472 to 196083 15179

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
192,536 + 15177 mRNA_6809 0.57 -2.5
192,686 - 15177 mRNA_6809 0.69 -3.1
192,690 - 15177 mRNA_6809 0.70 -2.6
192,964 + -1.5
192,992 + -1.2
193,102 - -2.7
193,578 + 15178 mRNA_6810 0.22 -1.3
193,584 + 15178 mRNA_6810 0.22 -0.7
193,713 + 15178 mRNA_6810 0.38 -3.3
193,719 + 15178 mRNA_6810 0.39 -1.3
194,012 - 15178 mRNA_6810 0.74 -0.9
194,116 + 15178 mRNA_6810 0.86 -1.0
194,117 - 15178 mRNA_6810 0.86 -0.3
194,146 + 15178 mRNA_6810 0.90 -1.3
194,258 + 0.7
194,302 - -0.9
194,302 + 0.5
194,393 - 0.7
194,414 - -3.9
194,422 - -0.5
194,437 + -2.0
194,451 + -0.1
194,461 + -2.9