Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6797

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6796: 15164 - Hypothetical Protein, at 155550 to 156068 15164 mRNA_6797: 15165 - BLAST Formin-like protein 3 [Rhizoctonia solani], at 156306 to 160746 15165 mRNA_6798: 15166 - Hypothetical Protein, at 161336 to 161885 15166

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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155,324 - -1.1
155,337 + -0.8
155,446 + -5.1
155,462 - -2.8
155,481 + -1.9
155,498 + -1.8
155,626 - 15164 mRNA_6796 0.15 0.1
155,632 - 15164 mRNA_6796 0.16 -3.0
155,646 - 15164 mRNA_6796 0.18 -2.9
155,651 + 15164 mRNA_6796 0.19 -1.5
155,708 - 15164 mRNA_6796 0.30 -2.1
155,754 - 15164 mRNA_6796 0.39 -0.5
155,771 - 15164 mRNA_6796 0.43 0.6
155,773 + 15164 mRNA_6796 0.43 -1.8
155,774 - 15164 mRNA_6796 0.43 -1.3
155,778 - 15164 mRNA_6796 0.44 -1.3
155,784 + 15164 mRNA_6796 0.45 -1.7
155,795 + 15164 mRNA_6796 0.47 -1.5
155,795 + 15164 mRNA_6796 0.47 -1.9
155,799 + 15164 mRNA_6796 0.48 -2.1
155,809 + 15164 mRNA_6796 0.50 -0.6
155,811 + 15164 mRNA_6796 0.50 -0.2
155,822 - 15164 mRNA_6796 0.52 -1.9
155,916 - 15164 mRNA_6796 0.71 -1.0
155,938 - 15164 mRNA_6796 0.75 -3.9
155,943 - 15164 mRNA_6796 0.76 -1.8
155,953 - 15164 mRNA_6796 0.78 -0.9
155,963 + 15164 mRNA_6796 0.80 0.2
156,099 - -1.0
156,108 + -2.1
156,117 - -0.4
156,410 + -1.3
156,498 - -0.3
156,519 - -0.9
156,679 - 0.3
156,679 - 1.5
156,918 + 15165 mRNA_6797 0.14 -1.2
156,919 - 15165 mRNA_6797 0.14 -2.5
156,921 + 15165 mRNA_6797 0.14 -1.1
157,228 - 15165 mRNA_6797 0.21 -0.4
157,256 - 15165 mRNA_6797 0.21 0.4
157,410 - 15165 mRNA_6797 0.25 -4.2
157,670 - 15165 mRNA_6797 0.31 0.5
157,966 - 15165 mRNA_6797 0.37 -1.2
158,738 + 15165 mRNA_6797 0.55 -0.6
159,110 + 15165 mRNA_6797 0.63 -2.5
159,436 - 15165 mRNA_6797 0.70 -1.3
159,605 + 15165 mRNA_6797 0.74 -0.7
159,732 + 15165 mRNA_6797 0.77 -2.5
159,961 - 15165 mRNA_6797 0.82 -0.9
160,150 + 15165 mRNA_6797 0.87 -0.7
160,230 + 15165 mRNA_6797 0.88 -1.8
160,238 + 15165 mRNA_6797 0.89 -2.0
160,268 + 15165 mRNA_6797 0.89 -1.9
160,341 + -0.9
160,418 - -0.4
160,438 - 1.1
160,467 - -2.1
160,524 + -1.3
160,557 - -0.7
160,630 - -1.1
160,647 + -3.4
160,705 - -4.0
160,710 + -2.4
160,731 - -2.2
160,731 - -3.0
160,742 - -1.0
160,781 - -2.0
160,830 - -0.6
160,870 + -1.4
160,923 - -1.4
160,960 - -0.8
160,961 - -1.0
160,968 + -0.3
161,004 - -0.6
161,018 + -3.3
161,039 - -0.7
161,058 - -2.6
161,085 - -3.0
161,100 - -2.5
161,104 + 0.1
161,105 - -1.4
161,108 + -2.1
161,109 - -1.5
161,117 + -1.8
161,117 - -2.7
161,120 - -1.6
161,120 - -3.5
161,144 + -1.6
161,149 - -0.2
161,187 - -1.9
161,187 - -1.7
161,188 + -0.6
161,202 - 1.9
161,207 + -1.1
161,210 + -3.4
161,213 + 0.4
161,224 - -1.6
161,224 - 0.0
161,228 - -1.9
161,229 + -0.0
161,235 - -1.8
161,249 - -1.6
161,249 - -3.1
161,250 + -1.9
161,251 + 1.7
161,254 + -0.8
161,254 + -2.2
161,254 + -0.4
161,256 - -0.4
161,257 + -2.1
161,261 - -3.6
161,263 + -2.6
161,264 + -1.3
161,264 + -1.1
161,272 + -5.0
161,275 + -0.5
161,278 - -3.3
161,280 - -1.0
161,302 + 1.1
161,311 - -3.1
161,333 + 1.2
161,402 - 15166 mRNA_6798 0.12 -0.9
161,416 - 15166 mRNA_6798 0.15 -3.4
161,424 + 15166 mRNA_6798 0.16 -2.2
161,427 - 15166 mRNA_6798 0.17 -1.1
161,431 - 15166 mRNA_6798 0.17 0.6
161,462 - 15166 mRNA_6798 0.23 -2.3
161,565 + 15166 mRNA_6798 0.42 -1.4
161,642 + 15166 mRNA_6798 0.56 0.3