Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6794

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6793: 15161 - KOG2375 Protein interacting with poly(A)-binding protein, at 144793 to 148155 15161 mRNA_6794: 15162 - K10773 NTH endonuclease III, at 148472 to 150085 15162 mRNA_6795: 15163 - KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1, at 150190 to 154769 15163

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
147,518 - 15161 mRNA_6793 0.81 -3.6
147,817 + 15161 mRNA_6793 0.90 -3.1
148,254 - -1.4
148,270 + -0.5
148,370 - -2.2
148,401 - -1.2
148,421 - -1.8
148,545 - 0.2
148,546 + -1.2
148,698 - 15162 mRNA_6794 0.14 1.2
148,700 - 15162 mRNA_6794 0.14 -2.1
149,032 + 15162 mRNA_6794 0.35 -0.7
149,257 - 15162 mRNA_6794 0.49 -3.9
149,551 - 15162 mRNA_6794 0.67 -0.3
149,796 - 15162 mRNA_6794 0.82 -0.1
149,852 + 15162 mRNA_6794 0.86 -1.0
150,009 - -2.1
150,133 + -1.7
150,138 + -1.7
150,151 - -3.4
150,282 - -2.7
150,296 + -2.2
150,417 + 1.8
150,469 - -1.8
150,608 + -1.3
150,864 - 15163 mRNA_6795 0.15 1.2
150,895 - 15163 mRNA_6795 0.15 -3.5
151,027 - 15163 mRNA_6795 0.18 -3.5
151,051 - 15163 mRNA_6795 0.19 -1.7