Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6786

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6785: 15153 - K03860 PIGQ, GPI1 phosphatidylinositol glycan, class Q, at 123273 to 125638 15153 mRNA_6786: 15154 - K14784 CMS1 protein CMS1, at 125988 to 127224 15154 mRNA_6787: 15155 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 127368 to 127805 15155 mRNA_6788: 15156 - K05853 ATP2A Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum, at 127975 to 131651 15156

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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125,152 - 15153 mRNA_6785 0.79 -1.8
125,159 + 15153 mRNA_6785 0.80 -1.4
125,339 + 15153 mRNA_6785 0.87 -1.0
125,447 + -3.2
125,736 + -1.7
125,764 - -2.5
125,790 - 0.6
125,793 - -2.9
125,918 - -0.7
125,920 - -1.6
125,933 - -2.1
125,956 + -3.8
126,080 - -1.2
126,083 - -0.2
126,084 + -0.5
126,108 + -2.0
126,111 + -3.7
126,527 - 15154 mRNA_6786 0.44 -2.0
127,838 - -1.2
127,841 + -2.1
127,863 + -3.8
127,863 - -1.2
127,864 + 1.7
127,866 - 0.0
127,867 - -1.1
128,011 - 0.0
128,013 + -3.4
128,029 + -2.0
128,058 + -1.6