Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6771

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6770: 15138 - K03350 APC3, CDC27 anaphase-promoting complex subunit 3, at 96842 to 100028 15138 mRNA_6771: 15139 - Hypothetical Protein, at 100994 to 101449 15139 mRNA_6772: 15140 - KOG0202 Ca2+ transporting ATPase, at 102291 to 102787 15140

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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100,230 - -1.4
100,244 - -1.3
100,258 - -2.1
100,258 + -1.8
100,265 + -0.3
100,349 - -2.4
100,379 + 0.1
100,389 + -0.1
100,404 + -3.2
100,410 - -3.5
100,430 + 0.1
100,435 + -0.8
100,594 - -1.0
100,603 - -0.9
100,612 - -1.4
100,614 + -2.9
100,625 + 0.2
100,709 - -1.9
100,727 - -0.1
100,782 - -1.2
100,828 - -2.4
100,842 - -1.1
100,850 + -1.7
101,009 - -3.3
101,085 - 15139 mRNA_6771 0.20 -1.1
101,436 - -2.1
101,542 - -0.3
101,694 + 0.2
102,198 - -1.7
102,200 + -3.5
102,221 + -1.8
102,335 - -3.4