Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6761

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6760: 15128 - Hypothetical Protein, at 77632 to 78666 15128 mRNA_6761: 15129 - K00944 AK3 nucleoside-triphosphate--adenylate kinase, at 78971 to 80180 15129 mRNA_6762: 15130 - K02942 RP-LP1, RPLP1 large subunit ribosomal protein LP1, at 80417 to 80968 15130

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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78,588 - 0.8
78,594 + -2.0
78,864 - 0.7
78,867 + -0.1
78,875 + -2.4
79,038 + -4.5
79,131 + 15129 mRNA_6761 0.13 0.1
79,164 - 15129 mRNA_6761 0.16 -3.4
79,172 - 15129 mRNA_6761 0.17 0.2
79,348 - 15129 mRNA_6761 0.31 -0.5
79,446 + 15129 mRNA_6761 0.39 1.1
79,481 + 15129 mRNA_6761 0.42 -1.2
79,606 + 15129 mRNA_6761 0.52 -1.3
79,666 + 15129 mRNA_6761 0.57 2.1
79,745 + 15129 mRNA_6761 0.64 -2.0
79,747 - 15129 mRNA_6761 0.64 -0.9
79,848 - 15129 mRNA_6761 0.72 -1.6
80,023 - 15129 mRNA_6761 0.87 -1.4
80,049 - 15129 mRNA_6761 0.89 -2.5
80,308 + -1.3