Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6747

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6746: 15114 - KOG3381 Uncharacterized conserved protein, at 49790 to 50693 15114 mRNA_6747: 15115 - Hypothetical Protein, at 50840 to 52306 15115 mRNA_6748: 15116 - Hypothetical Protein, at 52794 to 54250 15116

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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50,749 + -2.9
50,764 + -2.2
50,805 + -1.6
50,805 - -2.7
50,858 - -2.7
50,893 - -2.0
50,934 + -2.7
51,163 + 15115 mRNA_6747 0.22 -3.0
51,181 + 15115 mRNA_6747 0.23 -3.2
51,181 + 15115 mRNA_6747 0.23 -2.3
51,283 - 15115 mRNA_6747 0.30 0.1
51,283 + 15115 mRNA_6747 0.30 -1.6
51,353 + 15115 mRNA_6747 0.35 -1.7
51,620 + 15115 mRNA_6747 0.53 -2.7
52,031 + 15115 mRNA_6747 0.81 -3.3
52,236 + -1.6
52,262 - -1.5
52,360 + 0.5
52,381 + -0.4
52,493 - -1.7
52,496 + -0.6
52,517 + -2.0
52,660 + -2.9
52,665 + -2.0
52,667 - -1.4
52,776 - -1.3
52,806 + -1.4
52,889 - -2.3
52,936 - -0.7
53,065 - 15116 mRNA_6748 0.19 -1.8
53,090 + 15116 mRNA_6748 0.20 -1.0