Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6736

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6735: 15103 - Hypothetical Protein, at 24942 to 26366 15103 mRNA_6736: 15104 - K11527 K11527 two-component system, sensor histidine kinase and response regulator, at 26533 to 28608 15104 mRNA_6737: 15105 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 29328 to 32887 15105

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
25,636 + 15103 mRNA_6735 0.49 0.2
25,745 - 15103 mRNA_6735 0.56 -1.4
25,750 + 15103 mRNA_6735 0.57 -0.3
25,864 + 15103 mRNA_6735 0.65 -0.6
25,871 - 15103 mRNA_6735 0.65 -3.0
25,912 + 15103 mRNA_6735 0.68 -2.2
26,056 + 15103 mRNA_6735 0.78 -1.6
26,301 + -1.1
26,330 + -0.5
26,504 + -1.6
26,531 + -1.5
26,534 - -3.2
26,588 - -1.0
26,629 + -1.7
26,646 + -1.8
26,751 - 15104 mRNA_6736 0.11 -3.6
26,781 - 15104 mRNA_6736 0.12 -0.7
26,927 - 15104 mRNA_6736 0.19 -1.2
27,128 + 15104 mRNA_6736 0.29 -0.9
27,389 + 15104 mRNA_6736 0.41 -1.2
27,464 - 15104 mRNA_6736 0.45 -3.0
27,485 + 15104 mRNA_6736 0.46 -1.6
27,506 + 15104 mRNA_6736 0.47 -0.2
27,607 - 15104 mRNA_6736 0.52 -1.4
27,825 + 15104 mRNA_6736 0.62 -2.1
28,048 - 15104 mRNA_6736 0.73 -0.8
28,082 - 15104 mRNA_6736 0.75 -3.7
28,088 + 15104 mRNA_6736 0.75 -2.0
28,088 + 15104 mRNA_6736 0.75 -0.4
28,123 - 15104 mRNA_6736 0.77 -0.7
28,234 + 15104 mRNA_6736 0.82 -4.1
28,265 + 15104 mRNA_6736 0.83 -0.8
28,374 - 15104 mRNA_6736 0.89 -2.2
28,500 - -4.0
28,653 - -1.9
28,712 - -0.4
28,946 + -0.7
28,970 + -2.7
28,990 + -1.4
29,115 - -0.8
29,121 - -1.3
29,124 + -2.4
29,269 + -2.1
29,399 - -0.7
29,449 + -1.9
29,540 - -2.0
29,550 - -2.8
29,585 - -0.5
29,606 + -1.5