Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6725

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6725: 15093 - K07575 K07575 PUA domain protein, at 176 to 1349 15093 mRNA_6726: 15094 - Hypothetical Protein, at 1736 to 3438 15094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1 + 0.1
4 + -3.1
9 + -0.4
12 + 0.2
18 + -3.0
34 + -2.0
49 - -1.6
50 - -2.8
56 + 1.3
71 + 1.1
71 + 0.2
71 + -1.0
71 + -3.8
74 + -1.1
74 - 1.1
79 + -0.3
86 + -0.2
97 + 0.2
112 + 0.5
135 + -2.5
135 - 0.3
135 + 0.8
228 + -0.4
231 - 3.4
268 + 0.5
288 + -0.6
380 + 15093 mRNA_6725 0.17 -1.5
1,318 - -4.6
1,688 + -2.0
1,688 + -0.9
1,714 - -4.2
1,889 - -2.0
1,889 - -1.5
2,290 + 15094 mRNA_6726 0.33 0.4
2,349 - 15094 mRNA_6726 0.36 -2.1