Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6718

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6718: 15086 - K13711 PI4K2 phosphatidylinositol 4-kinase type 2, at 1526282 to 1529015 15086 mRNA_6719: 15087 - Hypothetical Protein, at 1530010 to 1530905 15087

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,525,772 - -1.5
1,525,794 - -1.0
1,525,865 + -1.0
1,525,896 - -1.5
1,526,001 + -0.3
1,526,049 - -0.2
1,526,280 - -0.6
1,526,296 + -0.6
1,526,459 - -0.1
1,526,534 - -1.8
1,526,575 + 15086 mRNA_6718 0.11 -1.3
1,526,610 - 15086 mRNA_6718 0.12 -3.4
1,526,629 + 15086 mRNA_6718 0.13 -2.2
1,526,727 + 15086 mRNA_6718 0.16 -1.0
1,526,846 - 15086 mRNA_6718 0.21 1.2
1,526,894 - 15086 mRNA_6718 0.22 0.6
1,527,167 - 15086 mRNA_6718 0.32 -2.1
1,527,644 + 15086 mRNA_6718 0.50 -2.7
1,527,737 - 15086 mRNA_6718 0.53 1.7
1,527,762 - 15086 mRNA_6718 0.54 -1.4
1,527,788 + 15086 mRNA_6718 0.55 -0.7
1,527,841 + 15086 mRNA_6718 0.57 -2.5
1,527,854 + 15086 mRNA_6718 0.57 0.1
1,528,084 + 15086 mRNA_6718 0.66 -2.2
1,528,302 - 15086 mRNA_6718 0.74 -0.2
1,528,302 + 15086 mRNA_6718 0.74 -0.7
1,528,427 + 15086 mRNA_6718 0.78 -0.4
1,528,471 + 15086 mRNA_6718 0.80 -0.6
1,528,490 + 15086 mRNA_6718 0.81 -2.0
1,528,647 - 15086 mRNA_6718 0.87 -1.5
1,528,656 + 15086 mRNA_6718 0.87 -0.6
1,528,657 - 15086 mRNA_6718 0.87 -0.7
1,528,731 + 15086 mRNA_6718 0.90 0.5
1,528,884 - -4.2
1,528,972 + -2.1
1,529,086 - -0.3
1,529,114 + -2.8
1,529,168 + -0.1
1,529,201 - -1.5
1,529,270 + -1.6
1,529,273 + -0.7
1,529,794 + -1.8
1,529,796 - -1.8