Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6712

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6712: 15080 - Hypothetical Protein, at 1515037 to 1516123 15080 mRNA_6713: 15081 - HMMPfam-RTA1 like protein-PF04479, at 1516568 to 1518041 15081

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,514,317 + -3.0
1,514,319 + 0.8
1,514,348 + -0.4
1,514,348 + -0.5
1,514,363 - -0.9
1,514,364 + -1.3
1,514,365 + -0.1
1,514,368 - -1.0
1,514,460 + -1.9
1,514,463 - -0.6
1,514,471 - -1.2
1,514,473 - -1.8
1,514,475 + -0.2
1,514,477 + -1.6
1,514,486 - -1.0
1,514,488 + -0.2
1,514,490 - -1.8
1,514,490 - 1.0
1,514,499 + -1.6
1,514,501 + -2.4
1,514,506 + -0.3
1,514,583 + -0.3
1,514,592 - -1.8
1,514,616 - -2.6
1,514,617 + -1.8
1,514,638 - 0.4
1,514,642 + -1.3
1,514,649 + -2.2
1,514,650 - -4.0
1,514,653 + 0.7
1,514,673 + -1.3
1,514,677 - -0.6
1,514,697 - -0.0
1,514,699 + 0.3
1,514,729 - -3.0
1,514,771 - -1.6
1,514,772 - -2.4
1,514,779 - -0.7
1,514,781 + -1.1
1,514,783 - -1.2
1,514,783 - -0.8
1,514,785 + -1.8
1,514,786 + -1.9
1,514,788 + -0.5
1,514,793 - -1.2
1,514,810 - -1.6
1,514,811 - -1.6
1,514,812 - -2.3
1,514,821 + 0.5
1,514,952 + 0.2
1,515,087 - -0.3
1,515,252 + 15080 mRNA_6712 0.20 1.2
1,515,680 + 15080 mRNA_6712 0.59 -0.2
1,515,974 - 15080 mRNA_6712 0.86 -2.8
1,515,984 + 15080 mRNA_6712 0.87 -1.7
1,516,287 + -0.3
1,516,585 - -0.1
1,516,718 + 15081 mRNA_6713 0.10 -0.1
1,516,746 + 15081 mRNA_6713 0.12 -2.4
1,517,053 + 15081 mRNA_6713 0.33 0.3