Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6693

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6692: 15060 - KOG3888 Gamma-butyrobetaine,2-oxoglutarate dioxygenase, at 1456937 to 1457982 15060 mRNA_6693: 15061 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 1458235 to 1460963 15061 mRNA_6694: 15062 - Hypothetical Protein, at 1461182 to 1464230 15062

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,457,941 + -0.1
1,458,234 - -2.0
1,458,240 - -1.2
1,458,250 + -0.6
1,458,273 - -2.1
1,458,431 + -2.8
1,458,561 + 15061 mRNA_6693 0.12 -1.6
1,458,596 - 15061 mRNA_6693 0.13 -2.8
1,458,774 - 15061 mRNA_6693 0.20 -2.4
1,458,819 - 15061 mRNA_6693 0.21 -1.6
1,459,282 + 15061 mRNA_6693 0.38 0.7
1,459,375 + 15061 mRNA_6693 0.42 -0.1
1,459,421 + 15061 mRNA_6693 0.43 -2.2
1,459,432 - 15061 mRNA_6693 0.44 -2.7
1,459,583 - 15061 mRNA_6693 0.49 -3.0
1,460,009 + 15061 mRNA_6693 0.65 -0.8
1,460,276 + 15061 mRNA_6693 0.75 -2.0
1,460,459 + 15061 mRNA_6693 0.81 -1.2
1,460,566 - 15061 mRNA_6693 0.85 -1.7
1,460,699 - 0.3
1,460,721 + -0.2
1,461,007 - -0.4