Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6691

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6690: 15058 - KOG4776 Uncharacterized conserved protein BCNT, at 1450331 to 1454298 15058 mRNA_6691: 15059 - KOG3010 Methyltransferase, at 1454894 to 1456156 15059 mRNA_6692: 15060 - KOG3888 Gamma-butyrobetaine,2-oxoglutarate dioxygenase, at 1456937 to 1457982 15060

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,454,081 - -0.2
1,454,184 + -2.7
1,454,807 - -1.8
1,454,933 + -1.3
1,455,147 + 15059 mRNA_6691 0.20 1.0
1,455,157 - 15059 mRNA_6691 0.21 -0.3
1,455,766 - 15059 mRNA_6691 0.69 -0.7
1,455,904 + 15059 mRNA_6691 0.80 -0.7
1,456,063 - -1.2
1,456,183 - -1.1
1,456,194 + -0.5
1,456,198 + -2.1
1,456,201 + 0.9
1,456,204 - -2.4
1,456,319 + -0.4
1,456,333 + -0.9
1,456,345 - -1.8
1,456,347 + -2.3
1,456,349 + -0.8
1,456,351 + -1.6
1,456,435 - -1.1