Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6582

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6581: 14949 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 1150957 to 1153150 14949 mRNA_6582: 14950 - K11517 HAO (S)-2-hydroxy-acid oxidase, at 1153547 to 1155730 14950 mRNA_6583: 14951 - Hypothetical Protein, at 1155972 to 1156740 14951

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,152,629 + 14949 mRNA_6581 0.76 -1.9
1,153,181 + -0.4
1,153,222 + -0.1
1,153,238 - 0.1
1,153,346 - -2.5
1,153,346 + -1.9
1,153,349 - -0.9
1,153,366 + -0.7
1,153,379 + -1.4
1,153,388 - -0.9
1,153,519 + 0.9
1,153,537 - -2.9
1,153,676 + 0.2
1,154,122 + 14950 mRNA_6582 0.26 -1.1
1,154,236 - 14950 mRNA_6582 0.32 -1.4
1,154,993 - 14950 mRNA_6582 0.66 -1.8
1,155,160 - 14950 mRNA_6582 0.74 -0.7
1,155,407 - 14950 mRNA_6582 0.85 -0.3
1,155,745 + -0.3
1,155,758 - -1.1
1,156,061 + 14951 mRNA_6583 0.12 -3.6