Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6503

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6502: 14870 - K02971 RP-S21e, RPS21 small subunit ribosomal protein S21e, at 937840 to 938370 14870 mRNA_6503: 14871 - K11360 SPT8 transcriptional activator SPT8, at 939011 to 940996 14871 mRNA_6504: 14872 - Hypothetical Protein, at 941388 to 943563 14872

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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938,795 + -1.7
938,796 - -2.0
938,798 - -2.4
938,798 - -1.5
938,809 + -1.4
938,815 + -2.2
938,938 + -0.7
938,965 - -1.1
939,092 - -2.1
939,106 - -2.8
939,113 - 0.1
939,123 - -2.5
939,128 + -1.4
939,402 + 14871 mRNA_6503 0.20 -0.8
939,402 + 14871 mRNA_6503 0.20 0.3
939,555 + 14871 mRNA_6503 0.27 -1.8
939,792 - 14871 mRNA_6503 0.39 -1.6
939,884 - 14871 mRNA_6503 0.44 -1.1
940,128 - 14871 mRNA_6503 0.56 -2.9
940,174 + 14871 mRNA_6503 0.59 -0.8
940,409 - 14871 mRNA_6503 0.70 -2.3
940,415 - 14871 mRNA_6503 0.71 -0.4
940,962 + 0.6
940,964 - -1.8
940,998 - -0.1
941,008 + 0.6
941,083 - -1.5
941,085 - 0.0
941,087 - -1.2
941,134 - -1.9
941,140 - -3.2
941,149 + -2.6
941,159 + -0.7
941,159 + -2.8
941,180 - -1.4
941,266 + -1.0
941,284 + -1.4
941,290 + -2.1
941,318 + -0.7
941,430 - -1.3
941,467 - -1.1
941,501 + -0.6
941,603 - -1.6
941,708 + 14872 mRNA_6504 0.15 -2.5
941,773 + 14872 mRNA_6504 0.18 -1.1