Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6501

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6500: 14868 - K14416 HBS1 elongation factor 1 alpha-like protein, at 933622 to 935186 14868 mRNA_6501: 14869 - K06902 UMF1 MFS transporter, UMF1 family, at 935425 to 937523 14869 mRNA_6502: 14870 - K02971 RP-S21e, RPS21 small subunit ribosomal protein S21e, at 937840 to 938370 14870

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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935,300 + -2.0
935,855 - 14869 mRNA_6501 0.20 -2.5
935,988 - 14869 mRNA_6501 0.27 -1.0
936,123 - 14869 mRNA_6501 0.33 -1.9
936,319 + 14869 mRNA_6501 0.43 -1.5
936,747 - 14869 mRNA_6501 0.63 -2.5
936,882 - 14869 mRNA_6501 0.69 -1.1
936,883 + 14869 mRNA_6501 0.69 -1.1
937,022 - 14869 mRNA_6501 0.76 -0.2
937,335 + -1.7
937,339 - -0.0
937,442 - -3.3
937,460 + -3.6
937,465 + 0.6
937,479 + -2.3
937,787 + -0.4