Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6489

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6488: 14856 - K01655 LYS21, LYS20 homocitrate synthase, at 905172 to 907549 14856 mRNA_6489: 14857 - KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases, at 907944 to 911303 14857 mRNA_6490: 14858 - KOG1698 Mitochondrial/chloroplast ribosomal protein L19, at 911663 to 912456 14858

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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907,277 - 14856 mRNA_6488 0.89 -1.9
907,654 + -2.3
907,770 + -2.2
907,797 - -1.3
907,831 + 0.9
907,895 - -1.8
908,062 - -1.4
908,078 + -1.1
908,123 - -2.9
908,235 - -1.0
908,378 + 14857 mRNA_6489 0.13 -1.9
908,770 - 14857 mRNA_6489 0.25 -2.9
908,897 - 14857 mRNA_6489 0.28 -4.6
909,029 + 14857 mRNA_6489 0.32 -2.7
909,061 + 14857 mRNA_6489 0.33 -3.1
909,124 + 14857 mRNA_6489 0.35 -6.0
909,247 - 14857 mRNA_6489 0.39 -1.9
909,327 - 14857 mRNA_6489 0.41 -1.7
909,966 + 14857 mRNA_6489 0.60 -0.3
910,010 - 14857 mRNA_6489 0.61 -0.4
910,022 + 14857 mRNA_6489 0.62 -2.9
910,047 - 14857 mRNA_6489 0.63 -3.3
910,115 - 14857 mRNA_6489 0.65 -0.9
910,124 + 14857 mRNA_6489 0.65 -1.0
910,251 - 14857 mRNA_6489 0.69 -1.0
910,351 - 14857 mRNA_6489 0.72 -0.5
910,824 + 14857 mRNA_6489 0.86 -1.5
911,132 - -1.6
911,228 + -1.1
911,263 - -0.4
911,264 - -2.2
911,566 - -0.5
911,661 - -2.9