Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6477

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6476: 14844 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 874196 to 881716 14844 mRNA_6477: 14845 - HMMPfam-Catalytic LigB subunit of aromatic ring-opening dioxygenase-PF02900,SUPERFAMILY--SSF53213, at 882440 to 883452 14845 mRNA_6478: 14846 - K15442 TAD3, ADAT3 tRNA-specific adenosine deaminase 3, at 884127 to 886487 14846

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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881,633 + -1.1
881,795 - -1.2
881,906 + -0.8
881,913 - -2.4
881,915 + -1.4
881,916 + -1.9
881,919 + -1.8
881,930 - -0.7
881,942 + -2.2
881,948 + -1.9
881,955 - -1.1
881,958 + -1.8
882,020 - -0.5
882,106 - -1.1
882,111 - -1.4
882,131 + -1.7
882,133 - -2.6
882,173 + -0.8
882,215 + -2.0
882,218 - -3.0
882,224 - -2.1
882,225 - -0.7
882,225 - -0.1
882,227 + -2.9
882,243 + -2.5
882,247 + -3.9
882,282 + -0.7
882,381 + -2.6
882,386 + -2.4
882,529 + -1.3
882,536 - -1.8
882,842 - 14845 mRNA_6477 0.40 -0.1
883,129 + 14845 mRNA_6477 0.68 -0.4
883,164 - 14845 mRNA_6477 0.71 -2.1
883,172 + 14845 mRNA_6477 0.72 -1.1
883,209 - 14845 mRNA_6477 0.76 -3.1
883,362 + -0.5
883,450 + 1.4
883,578 - -0.1
883,581 + 1.1
883,687 - -1.7
883,898 - -0.6
884,115 - -3.3