Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6474

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6473: 14841 - HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723, at 869282 to 871336 14841 mRNA_6474: 14842 - HMMPfam-Vitamin-D-receptor interacting Mediator subunit 4-PF10018, at 871729 to 872994 14842 mRNA_6475: 14843 - KOG3442 Uncharacterized conserved protein, at 873206 to 873968 14843

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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871,068 - 14841 mRNA_6473 0.87 -0.2
871,069 + 14841 mRNA_6473 0.87 -0.4
871,165 - -0.3
871,284 - 0.1
871,836 - -2.0
871,982 - 14842 mRNA_6474 0.20 -1.2
872,003 - 14842 mRNA_6474 0.22 0.1
872,833 - 14842 mRNA_6474 0.87 -1.4
873,150 + -0.4
873,165 - -1.0
873,169 - -0.3
873,188 + -1.3