Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6458

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6457: 14825 - Hypothetical Protein, at 833906 to 834580 14825 mRNA_6458: 14826 - K01193 INV, sacA beta-fructofuranosidase, at 835023 to 837288 14826 mRNA_6459: 14827 - BLAST beta-fructofuranosidase [Cryptococcus gattii VGIV IND..., at 837348 to 837887 14827

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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834,134 + 14825 mRNA_6457 0.34 0.0
834,448 + 14825 mRNA_6457 0.80 -0.6
834,545 - -1.5
834,548 + -5.0
834,944 + -2.7
835,141 - 0.5
835,148 + -3.6
835,378 - 14826 mRNA_6458 0.16 -1.1
836,044 + 14826 mRNA_6458 0.45 -1.0
836,067 + 14826 mRNA_6458 0.46 -1.6
836,286 + 14826 mRNA_6458 0.56 0.2
836,317 - 14826 mRNA_6458 0.57 -1.8
836,347 + 14826 mRNA_6458 0.58 -0.8
836,770 + 14826 mRNA_6458 0.77 0.8
836,867 - 14826 mRNA_6458 0.81 -1.7
836,873 + 14826 mRNA_6458 0.82 -0.6
836,928 - 14826 mRNA_6458 0.84 -2.2
837,670 + 14827 mRNA_6459 0.60 -3.4
837,915 - -3.3
837,966 - 1.0
838,077 + -2.9
838,152 - -1.4
838,193 + -1.1
838,265 + -2.1