Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6452

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6451: 14819 - Hypothetical Protein, at 823535 to 824941 14819 mRNA_6452: 14820 - Hypothetical Protein, at 825555 to 826689 14820 mRNA_6453: 14821 - K03801 lipB lipoyl(octanoyl) transferase, at 827236 to 828223 14821

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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824,664 - 14819 mRNA_6451 0.80 -3.0
824,750 + 14819 mRNA_6451 0.86 -1.1
824,765 - 14819 mRNA_6451 0.87 -0.7
825,032 + 2.3
825,034 - -0.5
825,037 + -1.4
825,041 - -0.5
825,044 + -2.6
825,129 - -2.4
825,206 + -2.3
825,213 + -0.9
825,223 - -0.3
825,328 + -0.4
825,345 + -3.7
825,345 + -0.8
825,397 - 0.1
825,510 + -1.2
825,510 - -3.6
825,552 - -2.3
825,632 + -0.7
825,665 - -0.4
825,754 - 14820 mRNA_6452 0.18 -2.4
825,782 + 14820 mRNA_6452 0.20 -1.1
825,901 + 14820 mRNA_6452 0.30 -0.7
825,908 - 14820 mRNA_6452 0.31 -0.7
825,937 - 14820 mRNA_6452 0.34 -1.2
825,974 + 14820 mRNA_6452 0.37 -1.1
826,131 + 14820 mRNA_6452 0.51 -2.1
826,194 + 14820 mRNA_6452 0.56 0.3
826,243 + 14820 mRNA_6452 0.61 -1.7
826,499 - 14820 mRNA_6452 0.83 -0.6
826,507 - 14820 mRNA_6452 0.84 -2.1
826,678 - -0.6
827,009 - -1.9
827,017 + -2.3
827,276 + 0.1
827,291 - -2.1