Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6448

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6447: 14815 - Hypothetical Protein, at 816253 to 817256 14815 mRNA_6448: 14816 - HMMPfam-F-box-like-PF12937, at 817584 to 818438 14816 mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818867 to 821319 14817

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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816,639 + 14815 mRNA_6447 0.38 0.5
816,944 + 14815 mRNA_6447 0.69 0.4
817,012 + 14815 mRNA_6447 0.76 -1.8
817,058 + 14815 mRNA_6447 0.80 -0.4
817,060 - 14815 mRNA_6447 0.80 -0.7
817,249 - -3.9
817,272 - -0.7
817,393 - 0.9
817,394 - -0.3
817,608 + 1.3
817,744 - 14816 mRNA_6448 0.19 -3.3
818,305 + 14816 mRNA_6448 0.84 0.7
818,492 - -0.6
818,538 - -2.5
818,651 + -0.3
818,790 - -0.5
818,859 - -0.6
818,917 - -1.2
819,025 + -2.6
819,050 + -3.1
819,184 - 14817 mRNA_6449 0.13 -0.7
819,262 - 14817 mRNA_6449 0.16 -1.2
819,262 + 14817 mRNA_6449 0.16 -2.3
819,317 - 14817 mRNA_6449 0.18 -4.7
819,352 - 14817 mRNA_6449 0.20 -1.6