Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6445

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6444: 14812 - Hypothetical Protein, at 808406 to 809831 14812 mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810637 to 814255 14813 mRNA_6446: 14814 - Hypothetical Protein, at 814402 to 816229 14814

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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809,998 - -0.9
810,031 - -0.6
810,202 + -1.4
810,226 - -3.7
810,488 - -0.8
810,541 - -1.2
810,889 - -0.4
810,934 + -2.7
810,989 - -3.5
811,032 - 14813 mRNA_6445 0.11 0.1
811,040 + 14813 mRNA_6445 0.11 -0.3
811,074 - 14813 mRNA_6445 0.12 -0.8
811,090 + 14813 mRNA_6445 0.13 -0.6
811,238 + 14813 mRNA_6445 0.17 -0.9
811,239 - 14813 mRNA_6445 0.17 0.2
811,388 + 14813 mRNA_6445 0.21 -1.7
811,525 + 14813 mRNA_6445 0.25 -1.6
811,609 + 14813 mRNA_6445 0.27 -1.1
811,722 - 14813 mRNA_6445 0.30 0.8
811,878 + 14813 mRNA_6445 0.34 -2.8
811,921 - 14813 mRNA_6445 0.35 -2.2
812,121 - 14813 mRNA_6445 0.41 -0.1
812,124 - 14813 mRNA_6445 0.41 -1.2
812,133 - 14813 mRNA_6445 0.41 1.1
812,142 + 14813 mRNA_6445 0.42 -1.0
812,142 + 14813 mRNA_6445 0.42 -0.6
812,563 - 14813 mRNA_6445 0.53 -2.6
812,625 - 14813 mRNA_6445 0.55 1.2
812,704 - 14813 mRNA_6445 0.57 1.5
812,740 + 14813 mRNA_6445 0.58 -2.1
812,869 + 14813 mRNA_6445 0.62 -1.3
813,001 - 14813 mRNA_6445 0.65 -1.8
813,327 - 14813 mRNA_6445 0.74 -2.5
813,631 + 14813 mRNA_6445 0.83 -2.1
813,643 + 14813 mRNA_6445 0.83 -1.8
813,655 - 14813 mRNA_6445 0.83 -1.8
813,664 - 14813 mRNA_6445 0.84 -1.6
813,810 - 14813 mRNA_6445 0.88 -0.8
813,890 + 14813 mRNA_6445 0.90 -1.8
813,922 + 0.3
813,929 + -0.1
813,989 - -0.3
814,010 + -4.3
814,041 - -1.2
814,055 - -2.0
814,072 + -2.3
814,076 - -2.1
814,196 - -3.0
814,209 + -3.6
814,211 + -3.2
814,222 + -1.6
814,317 - -2.0
814,335 + -1.6
814,357 + -0.9
814,364 - -1.7
814,487 - -1.9
814,500 - -2.2
814,717 - 14814 mRNA_6446 0.17 -1.1
814,718 + 14814 mRNA_6446 0.17 -1.5
814,742 - 14814 mRNA_6446 0.19 -0.7
814,796 + 14814 mRNA_6446 0.22 -4.0
814,881 - 14814 mRNA_6446 0.26 1.6
814,915 - 14814 mRNA_6446 0.28 -2.0
814,920 + 14814 mRNA_6446 0.28 -2.4
814,977 - 14814 mRNA_6446 0.31 -0.5
815,172 - 14814 mRNA_6446 0.42 -1.9
815,247 + 14814 mRNA_6446 0.46 -1.3