Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6437

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6436: 14804 - SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 796406 to 797649 14804 mRNA_6437: 14805 - K07511 ECHS1 enoyl-CoA hydratase, at 797925 to 799246 14805 mRNA_6438: 14806 - K15456 KTI12 protein KTI12, at 799617 to 800834 14806

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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797,172 - 14804 mRNA_6436 0.62 -0.8
797,183 - 14804 mRNA_6436 0.62 0.4
797,307 - 14804 mRNA_6436 0.72 -0.9
797,501 + 14804 mRNA_6436 0.88 -2.4
797,506 - 14804 mRNA_6436 0.88 -0.7
797,637 - -0.1
797,787 - -3.5
797,881 - -1.6
797,971 + -3.4
798,224 + 14805 mRNA_6437 0.23 -0.1
798,226 - 14805 mRNA_6437 0.23 0.2
798,394 - 14805 mRNA_6437 0.35 -0.7
798,548 + 14805 mRNA_6437 0.47 -0.1
798,549 + 14805 mRNA_6437 0.47 -2.2
798,566 + 14805 mRNA_6437 0.48 -0.8
798,838 + 14805 mRNA_6437 0.69 -0.3
798,840 - 14805 mRNA_6437 0.69 -2.4
799,103 - 14805 mRNA_6437 0.89 -2.8
799,124 + -0.9
799,161 + -1.1
799,271 - 0.3
799,276 - 0.5
799,414 - -2.1
799,419 - 1.2
799,435 - -1.0
799,435 - -1.3
799,442 + -0.4
799,444 - -2.1
799,449 + -0.2
799,450 + -1.0
799,553 - -3.1
799,565 - -0.8
799,599 + -0.3
799,605 + -2.0
799,616 - -3.1
799,765 + 14806 mRNA_6438 0.12 -2.1
799,847 + 14806 mRNA_6438 0.19 -1.0