Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6427

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6426: 14794 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 770724 to 773097 14794 mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773204 to 778326 14795 mRNA_6428: 14796 - KOG2208 Vigilin, at 779181 to 783068 14796

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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773,185 + -1.4
773,304 - -1.8
773,440 - -0.7
773,460 + -1.2
773,547 - 0.3
774,377 - 14795 mRNA_6427 0.23 -0.8
774,483 - 14795 mRNA_6427 0.25 -2.6
774,604 + 14795 mRNA_6427 0.27 -2.9
774,616 - 14795 mRNA_6427 0.28 -2.2
774,660 + 14795 mRNA_6427 0.28 0.5
774,663 - 14795 mRNA_6427 0.28 -3.7
775,347 - 14795 mRNA_6427 0.42 -0.5
775,821 + 14795 mRNA_6427 0.51 -1.6
776,386 + 14795 mRNA_6427 0.62 -0.2
776,392 + 14795 mRNA_6427 0.62 -1.2
776,477 + 14795 mRNA_6427 0.64 0.8
776,491 + 14795 mRNA_6427 0.64 -0.9
776,795 + 14795 mRNA_6427 0.70 -2.3
776,935 + 14795 mRNA_6427 0.73 -2.8
776,983 + 14795 mRNA_6427 0.74 -1.2
777,292 + 14795 mRNA_6427 0.80 -0.6
777,298 - 14795 mRNA_6427 0.80 -1.3
777,520 + 14795 mRNA_6427 0.84 -1.8
777,574 + 14795 mRNA_6427 0.85 -0.8
777,790 + 14795 mRNA_6427 0.90 -1.0
777,834 + -2.0
778,240 + -1.7
778,263 + -1.7
778,290 + 0.8
778,647 - -0.5
778,742 + -2.2
778,785 + -2.7
778,861 + -3.3
778,883 - -0.0
778,883 - -0.5
778,909 - -3.6
778,913 + -0.8
779,053 - -3.9