Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6407

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6406: 14774 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 736897 to 739297 14774 mRNA_6407: 14775 - HMMPfam-Protein of unknown function (DUF952)-PF06108,SUPERFAMILY--SSF56399, at 739479 to 740196 14775 mRNA_6408: 14776 - K19308 BMT6 25S rRNA (uracil2843-N3)-methyltransferase, at 740308 to 741629 14776

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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738,884 + 14774 mRNA_6406 0.83 -0.5
739,231 + 0.5
739,509 + -2.8
739,858 - 14775 mRNA_6407 0.53 -1.7
739,922 + 14775 mRNA_6407 0.62 -0.6
740,097 + 14775 mRNA_6407 0.86 -0.4
740,109 + 14775 mRNA_6407 0.88 -0.7
740,118 + 14775 mRNA_6407 0.89 -0.6
740,245 + -1.4
740,256 + 0.6
740,536 + 14776 mRNA_6408 0.17 -1.6
740,658 + 14776 mRNA_6408 0.26 1.0
740,682 + 14776 mRNA_6408 0.28 -0.1
740,829 - 14776 mRNA_6408 0.39 -0.1
741,116 + 14776 mRNA_6408 0.61 -2.6
741,148 + 14776 mRNA_6408 0.64 -1.9