Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6387

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6386: 14754 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 690611 to 691768 14754 mRNA_6387: 14755 - Hypothetical Protein, at 692168 to 693043 14755 mRNA_6388: 14756 - HMMPfam-BRCA1 C Terminus (BRCT) domain-PF00533,ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 693931 to 695622 14756

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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691,237 - 14754 mRNA_6386 0.54 -1.3
691,448 - 14754 mRNA_6386 0.72 -1.8
691,592 + 14754 mRNA_6386 0.85 -1.9
692,023 + 1.1
692,279 - 14755 mRNA_6387 0.13 -1.5
692,818 - 14755 mRNA_6387 0.74 0.1
692,980 - 0.0
693,174 + -3.0
693,265 - -1.0
693,410 - -1.7
693,412 + -2.3
693,436 + -3.0
693,440 - -1.6
693,443 - -1.2
693,569 + -1.1
693,597 + -3.7
693,735 - -2.4
693,748 + -2.0
693,872 + -0.7
693,874 - 2.7
693,885 + -1.1
693,890 + -3.4
693,891 - -0.8