Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6386

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6385: 14753 - K03107 SRP68 signal recognition particle subunit SRP68, at 687746 to 690070 14753 mRNA_6386: 14754 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 690611 to 691768 14754 mRNA_6387: 14755 - Hypothetical Protein, at 692168 to 693043 14755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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689,813 - 14753 mRNA_6385 0.89 0.8
690,117 - 1.0
690,117 - -2.6
690,117 - 0.2
690,117 - -0.2
690,125 + -0.3
690,128 - 0.2
690,130 - -0.2
690,161 + -2.5
690,418 - -1.8
690,419 - 0.9
690,439 + 1.0
690,493 + -3.3
690,853 + 14754 mRNA_6386 0.21 -4.1
690,861 + 14754 mRNA_6386 0.22 -2.1
691,237 - 14754 mRNA_6386 0.54 -1.3
691,448 - 14754 mRNA_6386 0.72 -1.8
691,592 + 14754 mRNA_6386 0.85 -1.9
692,023 + 1.1
692,279 - 14755 mRNA_6387 0.13 -1.5