Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6364

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6363: 14731 - K14553 UTP18 U3 small nucleolar RNA-associated protein 18, at 641098 to 643745 14731 mRNA_6364: 14732 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 643685 to 645198 14732 mRNA_6365: 14733 - HMMPfam-Trypsin-like peptidase domain-PF13365,SUPERFAMILY--SSF50494, at 645356 to 646894 14733

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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643,426 + 14731 mRNA_6363 0.88 -0.3
643,428 + 14731 mRNA_6363 0.88 -1.5
643,448 - 14731 mRNA_6363 0.89 0.5
644,012 - 14732 mRNA_6364 0.22 -0.5
644,412 - 14732 mRNA_6364 0.48 -2.9
644,571 - 14732 mRNA_6364 0.59 -3.3
644,871 + 14732 mRNA_6364 0.78 -1.9
645,179 + -0.7
645,181 + -1.4
645,298 - -2.2
645,310 - -1.6
645,313 + -1.5
645,313 + -3.1
645,336 - -0.5
645,340 + -0.6
645,477 + -4.1
645,484 - -2.5
645,509 + -3.2
645,636 + 14733 mRNA_6365 0.18 -2.5
645,785 + 14733 mRNA_6365 0.28 -3.5
645,793 - 14733 mRNA_6365 0.28 -3.5
645,930 - 14733 mRNA_6365 0.37 0.0
646,092 + 14733 mRNA_6365 0.48 2.1