Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6338

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6337: 14705 - Hypothetical Protein, at 579453 to 580646 14705 mRNA_6338: 14706 - KOG1515 Arylacetamide deacetylase, at 580711 to 582330 14706 mRNA_6339: 14707 - K03265 ETF1, ERF1 peptide chain release factor subunit 1, at 582931 to 584919 14707

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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580,091 - 14705 mRNA_6337 0.53 -0.7
580,392 - 14705 mRNA_6337 0.79 -2.5
580,682 - 0.0
580,804 + 0.3
581,004 + 14706 mRNA_6338 0.18 0.0
581,004 - 14706 mRNA_6338 0.18 -1.8
581,272 - 14706 mRNA_6338 0.35 0.5
581,443 + 14706 mRNA_6338 0.45 -1.1
581,714 + 14706 mRNA_6338 0.62 -2.3
582,249 - -1.3
582,264 - -1.6
582,268 + -0.9
582,277 + -0.7
582,284 - -1.0
582,429 + -2.6
582,606 - -0.2
582,621 - 0.5
582,628 + -0.1