Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6321

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6320: 14688 - Hypothetical Protein, at 540621 to 541463 14688 mRNA_6321: 14689 - Hypothetical Protein, at 542148 to 544178 14689 mRNA_6322: 14690 - K09420 MYB myb proto-oncogene protein, at 544392 to 544811 14690

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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541,149 + 14688 mRNA_6320 0.63 -3.7
541,149 - 14688 mRNA_6320 0.63 -0.8
541,155 + 14688 mRNA_6320 0.63 -1.0
541,159 + 14688 mRNA_6320 0.64 -3.3
541,165 - 14688 mRNA_6320 0.65 -3.0
541,171 - 14688 mRNA_6320 0.65 -0.5
541,182 + 14688 mRNA_6320 0.67 -1.5
541,182 - 14688 mRNA_6320 0.67 -0.6
541,184 + 14688 mRNA_6320 0.67 -1.0
541,226 + 14688 mRNA_6320 0.72 -2.3
541,234 - 14688 mRNA_6320 0.73 -2.1
541,235 - 14688 mRNA_6320 0.73 -2.0
541,237 + 14688 mRNA_6320 0.73 -2.1
541,248 + 14688 mRNA_6320 0.74 1.7
541,250 + 14688 mRNA_6320 0.75 -0.9
541,252 - 14688 mRNA_6320 0.75 -3.3
541,253 + 14688 mRNA_6320 0.75 -1.1
541,264 - 14688 mRNA_6320 0.76 -1.5
541,293 - 14688 mRNA_6320 0.80 -0.6
541,295 - 14688 mRNA_6320 0.80 -0.6
541,330 + 14688 mRNA_6320 0.84 -2.8
541,332 - 14688 mRNA_6320 0.84 -3.6
541,334 - 14688 mRNA_6320 0.85 -0.5
541,343 - 14688 mRNA_6320 0.86 -0.4
541,348 - 14688 mRNA_6320 0.86 -1.6
541,360 - 14688 mRNA_6320 0.88 2.6
541,371 - 14688 mRNA_6320 0.89 -0.4
541,373 + 14688 mRNA_6320 0.89 -0.9
541,380 + -1.4
541,380 + -1.4
541,397 - -1.2
541,405 + 0.5
541,411 - -2.0
541,464 + -2.9
541,476 - -1.8
541,483 + -1.6
541,501 + -2.8
541,510 + -1.3
541,517 - -0.7
541,520 + -2.7
541,525 + -0.3
541,529 - -1.6
541,668 + -3.5
541,670 - 0.0
541,679 + -1.8
541,696 + -0.1
541,713 + -2.6
541,754 - -0.5
541,829 - 0.3
541,833 + -1.0
542,265 - -0.5
542,388 + 14689 mRNA_6321 0.12 -1.0
542,552 + 14689 mRNA_6321 0.20 -2.2
542,554 - 14689 mRNA_6321 0.20 -0.5
542,559 - 14689 mRNA_6321 0.20 -3.1
542,714 + 14689 mRNA_6321 0.28 -2.5
542,859 + 14689 mRNA_6321 0.35 2.5
543,010 + 14689 mRNA_6321 0.42 -1.1
543,577 + 14689 mRNA_6321 0.70 -1.0
543,670 + 14689 mRNA_6321 0.75 -1.3
544,019 - -0.2
544,021 - -2.0
544,171 - -3.2
544,300 - -2.3
544,595 + 14690 mRNA_6322 0.48 -2.5
544,599 + 14690 mRNA_6322 0.49 -0.3
544,605 + 14690 mRNA_6322 0.51 -0.0
544,611 - 14690 mRNA_6322 0.52 0.2
544,619 + 14690 mRNA_6322 0.54 -3.9
544,751 + 14690 mRNA_6322 0.85 -0.2
544,760 - 14690 mRNA_6322 0.88 -3.8
544,814 - -2.3
544,877 - -0.3
544,890 - -1.3
545,170 - -3.7