Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6318

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6317: 14685 - K11649 SMARCC SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C, at 532881 to 534866 14685 mRNA_6318: 14686 - Hypothetical Protein, at 535354 to 538435 14686 mRNA_6319: 14687 - KOG1729 FYVE finger containing protein, at 538943 to 540662 14687

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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534,906 + 0.4
534,916 - -1.7
534,924 - -3.2
534,925 + -1.4
534,926 + -1.6
534,936 + -0.2
535,061 + -0.1
535,211 + -1.2
535,217 + -2.5
535,489 - -1.6
535,530 + -1.5
535,828 + 14686 mRNA_6318 0.15 -1.9
536,134 + 14686 mRNA_6318 0.25 -3.5
536,544 - 14686 mRNA_6318 0.39 0.2
537,422 - 14686 mRNA_6318 0.67 0.2
537,446 - 14686 mRNA_6318 0.68 0.2
537,730 + 14686 mRNA_6318 0.77 -0.3
537,764 - 14686 mRNA_6318 0.78 -3.2
537,901 - 14686 mRNA_6318 0.83 -1.4
538,199 - -0.3
538,377 + -2.4
538,450 + -1.0
538,485 - -2.1
538,769 + -0.2
538,772 + -1.3
538,915 - -1.0
539,219 + 14687 mRNA_6319 0.16 -1.9
539,331 + 14687 mRNA_6319 0.23 -1.1