Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6314

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6313: 14681 - K10592 HUWE1, MULE, ARF-BP1 E3 ubiquitin-protein ligase HUWE1, at 512417 to 524941 14681 mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525320 to 527665 14682 mRNA_6315: 14683 - K10609 CUL4 cullin 4, at 528215 to 531333 14683

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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525,074 - -0.8
525,399 - -0.6
525,820 - 14682 mRNA_6314 0.21 -1.1
526,139 - 14682 mRNA_6314 0.35 -1.6
526,314 - 14682 mRNA_6314 0.42 -1.2
526,458 + 14682 mRNA_6314 0.49 -1.7
526,571 - 14682 mRNA_6314 0.53 -1.9
526,584 - 14682 mRNA_6314 0.54 -1.2
526,602 - 14682 mRNA_6314 0.55 -2.4
526,740 - 14682 mRNA_6314 0.61 -1.7
527,356 - 14682 mRNA_6314 0.87 -2.9
527,625 + -1.9
527,897 + -1.3
527,902 + -1.8
527,902 - -0.5
527,930 + -3.2
527,943 - -1.2
528,014 + 2.7
528,048 - -0.8
528,227 + -1.7