Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6287

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6286: 14654 - HMMPfam-Protein of unknown function (DUF3128)-PF11326, at 444214 to 444568 14654 mRNA_6287: 14655 - K01262 pepP Xaa-Pro aminopeptidase, at 445052 to 447744 14655 mRNA_6288: 14656 - KOG0876 Manganese superoxide dismutase, at 448035 to 449039 14656

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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444,722 - 0.1
444,853 - -0.2
444,867 - -1.3
444,868 - -3.2
444,872 + -1.6
444,978 + 0.6
445,014 - -1.4
445,015 - -2.1
445,021 - 0.5
445,036 - -1.4
445,050 - 0.7
445,052 - -1.8
445,059 + -2.8
445,144 + 1.3
445,168 - -2.4
445,177 - -0.9
445,177 + -1.1
445,209 + -0.8
445,212 + -0.1
445,221 - -1.0
445,287 + -1.3
445,333 - 14655 mRNA_6287 0.10 -1.5
445,347 - 14655 mRNA_6287 0.11 -2.6
445,351 + 14655 mRNA_6287 0.11 -0.7
445,670 + 14655 mRNA_6287 0.23 -1.8
445,726 + 14655 mRNA_6287 0.25 -2.5
445,759 - 14655 mRNA_6287 0.26 -0.2
445,767 - 14655 mRNA_6287 0.27 -0.5
446,147 + 14655 mRNA_6287 0.41 0.3
446,331 + 14655 mRNA_6287 0.47 -3.1
446,660 - 14655 mRNA_6287 0.60 -0.2
446,680 + 14655 mRNA_6287 0.60 -0.5
447,210 - 14655 mRNA_6287 0.80 0.4
447,778 - -2.7
447,957 + -1.4
448,489 - 14656 mRNA_6288 0.45 -2.1
448,520 + 14656 mRNA_6288 0.48 -1.2