Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6261

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385089 to 388417 14630

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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382,089 + -2.0
382,089 + -2.6
382,104 + 1.4
382,110 - -2.5
382,132 + -1.6
382,143 - -0.3
382,189 - -2.6
382,195 - -3.2
382,212 + -1.3
382,220 + 1.4
382,238 - -1.1
382,240 - -2.6
382,249 + -0.5
382,254 - -1.5
382,264 - 0.1
382,289 - 0.2
382,293 - -1.0
382,307 + -1.7
382,324 + -3.0
382,332 + -3.3
382,340 + -2.1
382,345 + 0.1
382,349 - -0.5
382,360 + -0.5
382,363 + -1.2
382,365 + -2.6
382,369 + -2.0
382,370 - -3.2
382,370 - 0.2
382,375 + -1.8
382,381 + -1.6
382,418 - -0.4
382,423 + 0.1
382,433 + -0.7
382,434 - -2.9
382,436 + -1.5
382,436 - -0.7
382,436 - 1.1
382,437 - 0.1
382,448 - -0.5
382,449 + 0.4
382,451 + -0.3
382,471 - -3.1
382,503 + -1.6
382,516 + -3.4
382,529 - -1.2
382,531 + -2.2
382,531 + -1.7
382,535 + -0.6
382,542 + -1.0
382,543 - -3.6
382,546 - -1.5
382,549 - -1.1
382,550 - -2.4
382,556 + 0.7
382,566 - -0.9
382,570 - 1.4
382,571 - -1.9
382,573 - -1.1
382,575 - 0.8
382,583 - 0.3
382,583 - 0.1
382,586 + -0.1
382,586 + -1.7
382,587 + 0.2
382,588 - -2.6
382,588 - 0.2
382,590 - -1.1
382,592 - -1.8
382,594 + -3.1
382,603 + -2.5
382,652 - -1.1
382,663 - -1.4
382,691 - -1.9
382,695 + -1.4
382,700 + -2.5
382,707 - -2.0
382,713 - -0.2
382,724 + -3.2
382,726 + -0.2
382,732 + -1.7
382,866 - 0.2
382,884 + 1.3
383,004 - -0.9
383,005 + -2.6
383,014 - -1.8
383,016 + -2.3
383,158 - -1.0
383,166 + -1.2
383,738 - 14629 mRNA_6261 0.45 -0.4
383,822 + 14629 mRNA_6261 0.50 1.0
383,893 - 14629 mRNA_6261 0.55 -0.8
383,903 + 14629 mRNA_6261 0.55 -1.8
384,042 - 14629 mRNA_6261 0.64 -1.0
384,044 + 14629 mRNA_6261 0.64 0.3
384,045 - 14629 mRNA_6261 0.64 -2.8
384,188 + 14629 mRNA_6261 0.73 0.3
384,494 - 1.4
384,502 - 0.2
384,654 - -2.6
384,686 - -0.3
384,779 - -1.6
384,801 - -1.1
384,803 - -1.4
384,812 + -1.5
384,823 - -3.6
384,848 - 0.2
384,850 - -0.9
384,867 + -2.4
384,877 - -2.0
384,883 - 0.1
384,893 - 0.5
384,894 - -0.7
384,897 + -1.0
384,897 + -0.7
384,899 + -0.7
384,900 + -1.4
384,905 - -0.4
384,933 + -2.2
384,934 - -0.2
384,934 - -0.4
384,939 + -0.6
384,940 - -0.5
384,940 - -0.5
384,946 + 1.7
384,955 + -0.6
384,964 - -1.0
384,976 + -1.3
384,983 - -2.2
384,993 - -1.0
385,074 - 0.4
385,079 - -2.3
385,080 + 1.7
385,087 - -1.8
385,091 + 0.4
385,092 - 1.6
385,186 + 0.1
385,217 + 0.9
385,257 - -1.1
385,276 + -1.1
385,297 - -1.3
385,329 - -1.0
385,332 + -1.1
385,363 - -0.7
385,389 - 1.1
385,394 - -0.5
385,401 - -2.9
385,558 + 14630 mRNA_6262 0.14 0.0