Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6237

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6236: 14604 - Hypothetical Protein, at 319520 to 321215 14604 mRNA_6237: 14605 - K20061 ALY1_2, ART3_6 arrestin-related trafficking adapter 3/6, at 321480 to 324944 14605 mRNA_6238: 14606 - K13205 AAR2, C20orf4 A1 cistron-splicing factor AAR2, at 325534 to 327076 14606

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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320,495 - 14604 mRNA_6236 0.57 -0.8
320,525 - 14604 mRNA_6236 0.59 -1.6
320,626 + 14604 mRNA_6236 0.65 3.1
320,765 - 14604 mRNA_6236 0.73 -2.3
320,924 + 14604 mRNA_6236 0.83 -3.2
321,070 + -1.4
321,071 + -1.2
321,076 - -1.2
321,214 + 0.4
321,217 + -0.6
321,230 + -2.8
321,239 - -3.1
321,385 + -0.7
321,513 - -1.0
321,655 - -1.8
321,976 - 14605 mRNA_6237 0.14 -0.5
322,115 + 14605 mRNA_6237 0.18 -1.0
322,147 + 14605 mRNA_6237 0.19 -0.9
322,263 + 14605 mRNA_6237 0.23 -2.2
322,429 + 14605 mRNA_6237 0.27 -3.8
322,640 + 14605 mRNA_6237 0.33 -2.9
322,990 + 14605 mRNA_6237 0.44 -2.6
323,105 - 14605 mRNA_6237 0.47 -1.5
323,293 + 14605 mRNA_6237 0.52 -1.2
323,328 - 14605 mRNA_6237 0.53 -3.3
323,563 + 14605 mRNA_6237 0.60 -0.0
323,667 + 14605 mRNA_6237 0.63 -1.2
323,703 + 14605 mRNA_6237 0.64 -2.5
323,758 + 14605 mRNA_6237 0.66 0.2
323,834 + 14605 mRNA_6237 0.68 -0.9
324,167 - 14605 mRNA_6237 0.78 -3.6
324,271 - 14605 mRNA_6237 0.81 -2.6
324,386 - 14605 mRNA_6237 0.84 -1.6
324,411 + 14605 mRNA_6237 0.85 -0.8
324,412 - 14605 mRNA_6237 0.85 -1.5
324,428 + 14605 mRNA_6237 0.85 -0.8
324,552 + 14605 mRNA_6237 0.89 -0.8
324,968 + -0.2
324,991 - -3.9
325,002 - -2.1
325,127 - 0.0
325,159 + 0.1
325,292 - -1.5
325,297 + -0.9
325,308 + -4.1
325,424 - -0.8
325,441 - 0.4
325,448 - -0.8
325,460 - -3.2
325,462 - -0.6
325,463 + -0.1
325,470 + -1.6
325,473 - -1.3
325,481 + -1.3
325,495 + -1.9
325,533 - -2.8
325,556 - -1.6
325,574 + -0.6
325,598 + -2.3