Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6236

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6235: 14603 - K17279 REEP5_6 receptor expression-enhancing protein 5/6, at 318135 to 318876 14603 mRNA_6236: 14604 - Hypothetical Protein, at 319520 to 321215 14604 mRNA_6237: 14605 - K20061 ALY1_2, ART3_6 arrestin-related trafficking adapter 3/6, at 321480 to 324944 14605

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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318,737 + 14603 mRNA_6235 0.81 -0.1
319,109 - -2.0
319,263 - -2.0
319,271 + -2.4
319,272 + 0.2
319,278 + -1.6
319,281 + 0.6
319,285 - -2.5
319,289 - 0.1
319,292 + -1.5
319,294 - 1.4
319,302 + -2.9
319,883 - 14604 mRNA_6236 0.21 -1.5
320,026 + 14604 mRNA_6236 0.30 -1.0
320,044 - 14604 mRNA_6236 0.31 -2.9
320,048 - 14604 mRNA_6236 0.31 -2.1
320,051 + 14604 mRNA_6236 0.31 -0.4
320,333 + 14604 mRNA_6236 0.48 0.1
320,364 + 14604 mRNA_6236 0.50 -0.9
320,495 - 14604 mRNA_6236 0.57 -0.8
320,525 - 14604 mRNA_6236 0.59 -1.6
320,626 + 14604 mRNA_6236 0.65 3.1
320,765 - 14604 mRNA_6236 0.73 -2.3
320,924 + 14604 mRNA_6236 0.83 -3.2
321,070 + -1.4
321,071 + -1.2
321,076 - -1.2
321,214 + 0.4
321,217 + -0.6
321,230 + -2.8
321,239 - -3.1
321,385 + -0.7
321,513 - -1.0
321,655 - -1.8
321,976 - 14605 mRNA_6237 0.14 -0.5
322,115 + 14605 mRNA_6237 0.18 -1.0
322,147 + 14605 mRNA_6237 0.19 -0.9