Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6206

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244969 to 246074 14573 mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246520 to 247686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248249 to 248882 14575

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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245,543 - 14573 mRNA_6205 0.52 -1.4
245,658 + 14573 mRNA_6205 0.62 -0.1
245,969 + -1.5
246,113 - -1.8
246,122 - -3.0
246,131 - -1.5
246,279 + 0.7
246,290 + -2.8
246,297 + -1.6
247,151 - 14574 mRNA_6206 0.54 -0.9
247,249 - 14574 mRNA_6206 0.62 -2.3
247,733 - -3.0
247,883 - -1.6
247,886 + 0.8
247,890 + 0.4
247,919 + 0.5
247,922 - -0.5
248,176 + -2.2
248,317 - 14575 mRNA_6207 0.11 -0.2
248,344 - 14575 mRNA_6207 0.15 -3.3
248,505 + 14575 mRNA_6207 0.40 -2.0