Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6202

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6201: 14569 - Hypothetical Protein, at 236476 to 237020 14569 mRNA_6202: 14570 - KOG4475 FOG Immunoglobin and related proteins, at 237374 to 240451 14570 mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240769 to 243130 14571

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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236,377 + -0.7
236,507 - 0.2
236,539 + 14569 mRNA_6201 0.12 -0.8
236,540 - 14569 mRNA_6201 0.12 0.5
236,549 + 14569 mRNA_6201 0.13 -1.1
236,561 - 14569 mRNA_6201 0.16 -2.6
236,565 - 14569 mRNA_6201 0.16 0.0
236,568 + 14569 mRNA_6201 0.17 -0.9
236,588 - 14569 mRNA_6201 0.21 -1.0
236,637 + 14569 mRNA_6201 0.30 -1.3
236,649 - 14569 mRNA_6201 0.32 -0.5
236,676 + 14569 mRNA_6201 0.37 -1.8
236,683 + 14569 mRNA_6201 0.38 -0.4
236,703 - 14569 mRNA_6201 0.42 0.8
236,707 + 14569 mRNA_6201 0.42 -0.2
236,720 + 14569 mRNA_6201 0.45 -1.1
236,720 + 14569 mRNA_6201 0.45 0.0
236,740 - 14569 mRNA_6201 0.48 -2.3
236,813 - 14569 mRNA_6201 0.62 -3.2
236,823 + 14569 mRNA_6201 0.64 -2.5
236,842 - 14569 mRNA_6201 0.67 0.9
236,848 + 14569 mRNA_6201 0.68 -3.0
236,852 + 14569 mRNA_6201 0.69 -2.0
236,853 + 14569 mRNA_6201 0.69 -1.7
236,858 - 14569 mRNA_6201 0.70 0.1
236,865 - 14569 mRNA_6201 0.71 -0.5
236,866 + 14569 mRNA_6201 0.72 -0.9
236,875 + 14569 mRNA_6201 0.73 0.1
236,886 + 14569 mRNA_6201 0.75 -0.9
237,000 + 1.1
237,017 + -0.9
237,024 - -2.2
237,026 + -2.8
237,026 - -0.7
237,031 + -0.1
237,303 - -2.4
237,581 - 1.6
237,602 - -0.9
237,873 + 14570 mRNA_6202 0.16 -0.9
237,918 - 14570 mRNA_6202 0.18 -1.0
238,484 + 14570 mRNA_6202 0.36 -0.9
238,767 - 14570 mRNA_6202 0.45 -1.0
238,999 + 14570 mRNA_6202 0.53 -1.8
239,120 - 14570 mRNA_6202 0.57 -1.5
240,174 - -1.4
240,418 - -0.5
240,617 - 0.8
240,827 - -3.1
240,993 + -2.7
241,014 + 14571 mRNA_6203 0.10 0.4
241,036 + 14571 mRNA_6203 0.11 -0.3
241,041 + 14571 mRNA_6203 0.12 -3.8
241,156 - 14571 mRNA_6203 0.16 -1.4
241,167 - 14571 mRNA_6203 0.17 -0.1