Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6200

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230911 to 232731 14567 mRNA_6200: 14568 - Hypothetical Protein, at 233137 to 235524 14568 mRNA_6201: 14569 - Hypothetical Protein, at 236476 to 237020 14569

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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232,202 - 14567 mRNA_6199 0.71 -2.3
232,335 - 14567 mRNA_6199 0.78 -0.1
232,458 - 14567 mRNA_6199 0.85 -2.5
232,469 - 14567 mRNA_6199 0.86 -1.0
232,478 - 14567 mRNA_6199 0.86 -0.5
232,509 - 14567 mRNA_6199 0.88 -0.6
232,514 - 14567 mRNA_6199 0.88 -1.5
232,597 - -3.2
232,618 + -0.2
232,626 - -1.6
232,637 + -0.5
232,643 - -2.2
232,657 + 1.0
232,783 - -3.2
232,815 + -1.8
232,821 + 0.1
232,953 - -0.8
233,105 - -0.1
233,829 - 14568 mRNA_6200 0.29 -0.0
234,007 - 14568 mRNA_6200 0.36 -2.2
234,147 - 14568 mRNA_6200 0.42 -1.6
234,147 + 14568 mRNA_6200 0.42 -1.7
234,860 + 14568 mRNA_6200 0.72 -1.3
235,142 + 14568 mRNA_6200 0.84 -1.8
235,142 + 14568 mRNA_6200 0.84 0.2
235,436 - 0.2
235,461 - -2.9
235,559 + -3.5
235,572 - -0.8
235,575 - -1.0
235,575 + -0.2
235,579 - -0.2
235,608 + -1.2
235,615 - -2.2
235,631 - -0.6
235,633 - -0.2
235,634 + -2.9
235,701 + 1.1
235,775 + -0.6
236,071 - -0.8
236,081 - -1.8
236,229 + 0.5
236,234 - -0.1
236,311 - -2.7
236,359 + -1.1
236,371 - -2.5
236,377 + -0.7
236,507 - 0.2