Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6192

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218019 to 218832 14559 mRNA_6192: 14560 - Hypothetical Protein, at 219520 to 220950 14560 mRNA_6193: 14561 - Hypothetical Protein, at 221060 to 222668 14561

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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218,752 + -1.0
219,011 - -1.2
219,135 + -1.7
219,142 - -2.9
219,151 + -0.7
219,156 + -2.6
219,157 - -1.9
219,161 - -0.6
219,161 - -1.9
219,175 - -0.4
219,179 + -1.2
219,188 + 2.4
219,210 - -0.8
219,216 + -2.2
219,228 + 0.4
219,229 + -2.2
219,232 + -4.1
219,288 + -2.5
219,290 + -2.5
219,320 - -0.9
219,328 + -1.7
219,486 + 0.1
219,617 - -1.5
219,654 - 0.4
219,664 + 14560 mRNA_6192 0.10 -1.3
219,775 + 14560 mRNA_6192 0.18 1.3
219,795 - 14560 mRNA_6192 0.19 0.2
220,359 - 14560 mRNA_6192 0.59 1.3
220,407 + 14560 mRNA_6192 0.62 -0.6
220,931 - -2.1
220,942 + -3.2
221,000 + -1.8
221,130 - -2.3
221,235 - 14561 mRNA_6193 0.11 -0.7
221,246 + 14561 mRNA_6193 0.12 -2.3
221,496 - 14561 mRNA_6193 0.27 -3.1
221,814 + 14561 mRNA_6193 0.47 -0.8