Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6173

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6172: 14540 - K02685 PRI2 DNA primase large subunit, at 169850 to 171909 14540 mRNA_6173: 14541 - K00698 CHS1 chitin synthase, at 172279 to 176176 14541 mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176764 to 178095 14542

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
171,959 - 2.0
171,980 - 0.1
171,984 + -0.6
171,985 + -2.4
171,995 + -2.0
172,005 + -1.0
172,157 + -1.0
172,166 + -1.8
172,237 + -2.5
172,289 + -1.5
172,293 - 2.1
172,426 + -1.0
172,637 - -1.4
172,638 + -0.9
172,714 - 14541 mRNA_6173 0.11 -0.8
172,896 + 14541 mRNA_6173 0.16 0.1
172,910 + 14541 mRNA_6173 0.16 -0.5
172,995 - 14541 mRNA_6173 0.18 -1.7
173,141 + 14541 mRNA_6173 0.22 0.0
173,402 - 14541 mRNA_6173 0.29 0.8
173,409 + 14541 mRNA_6173 0.29 -3.7
173,412 - 14541 mRNA_6173 0.29 -2.5
173,420 + 14541 mRNA_6173 0.29 -1.1
173,501 - 14541 mRNA_6173 0.31 -1.5
173,595 - 14541 mRNA_6173 0.34 -1.6
173,595 - 14541 mRNA_6173 0.34 -0.0
173,611 + 14541 mRNA_6173 0.34 -0.3
173,797 - 14541 mRNA_6173 0.39 0.1
173,922 + 14541 mRNA_6173 0.42 -4.1
174,285 - 14541 mRNA_6173 0.51 0.3
174,463 - 14541 mRNA_6173 0.56 -1.8
174,528 + 14541 mRNA_6173 0.58 -0.7
174,766 - 14541 mRNA_6173 0.64 -1.5
174,835 - 14541 mRNA_6173 0.66 -0.0
175,211 - 14541 mRNA_6173 0.75 -1.7
175,217 + 14541 mRNA_6173 0.75 -2.1
175,238 - 14541 mRNA_6173 0.76 -1.2
175,312 - 14541 mRNA_6173 0.78 -2.0
175,325 - 14541 mRNA_6173 0.78 -1.7
175,346 + 14541 mRNA_6173 0.79 -1.2
175,364 - 14541 mRNA_6173 0.79 -3.4
175,365 - 14541 mRNA_6173 0.79 -0.0
175,483 + 14541 mRNA_6173 0.82 -2.3
175,752 - 14541 mRNA_6173 0.89 1.8
175,805 + -1.1
175,870 + -2.6
175,941 + -1.8
175,958 - -2.5
176,086 + -3.7
176,107 + -2.9
176,243 + 0.2
176,244 - -2.2
176,249 + -3.4
176,253 - -2.0
176,267 + -0.8
176,448 + -0.4
176,541 - -2.1
176,545 - -0.6
176,553 - -2.0
176,560 + -0.7
176,561 + -1.4
176,563 + -0.4
176,641 - 0.7
176,642 + -0.6
176,645 - -1.3
176,768 - -1.9
176,780 + 0.3
176,932 - 14542 mRNA_6174 0.13 -1.5
176,938 + 14542 mRNA_6174 0.13 0.5
176,938 + 14542 mRNA_6174 0.13 -1.5
177,065 - 14542 mRNA_6174 0.23 -1.1