Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6171

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6170: 14538 - KOG3476 Microtubule-associated protein CRIPT, at 165822 to 166606 14538 mRNA_6171: 14539 - SUPERFAMILY--SSF52047, at 166707 to 169416 14539 mRNA_6172: 14540 - K02685 PRI2 DNA primase large subunit, at 169850 to 171909 14540

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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165,788 + -1.5
165,893 + -2.1
165,926 + 14538 mRNA_6170 0.13 -2.0
165,936 + 14538 mRNA_6170 0.15 2.1
166,064 + 14538 mRNA_6170 0.31 -2.0
166,096 + 14538 mRNA_6170 0.35 0.6
166,207 - 14538 mRNA_6170 0.49 0.1
166,361 + 14538 mRNA_6170 0.69 0.0
166,616 - -1.6
166,624 - -0.4
166,639 + -2.4
166,653 + -0.7
166,655 - -2.5
166,655 - -0.7
166,665 - 0.2
167,119 - 14539 mRNA_6171 0.15 -2.3
167,208 - 14539 mRNA_6171 0.18 1.3
167,238 + 14539 mRNA_6171 0.20 -1.4
167,258 - 14539 mRNA_6171 0.20 -2.8
167,270 + 14539 mRNA_6171 0.21 -2.5
167,384 - 14539 mRNA_6171 0.25 -1.7
167,411 - 14539 mRNA_6171 0.26 1.3
167,821 - 14539 mRNA_6171 0.41 -0.4
167,893 - 14539 mRNA_6171 0.44 -2.8
167,987 - 14539 mRNA_6171 0.47 -2.4
168,096 - 14539 mRNA_6171 0.51 -1.3
168,275 + 14539 mRNA_6171 0.58 -2.4
168,303 + 14539 mRNA_6171 0.59 -0.3
168,625 - 14539 mRNA_6171 0.71 -0.8
168,946 - 14539 mRNA_6171 0.83 -0.8
169,580 - -2.6
169,583 - -0.5
169,594 + 0.1
169,756 + -2.5
169,888 - -1.3