Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6152

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6151: 14519 - Hypothetical Protein, at 124674 to 126819 14519 mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127167 to 130520 14520 mRNA_6153: 14521 - K00757 udp, UPP uridine phosphorylase, at 131341 to 132602 14521

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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126,269 - 14519 mRNA_6151 0.74 -2.8
126,332 + 14519 mRNA_6151 0.77 -1.8
126,435 - 14519 mRNA_6151 0.82 -3.0
126,460 + 14519 mRNA_6151 0.83 -1.5
126,465 - 14519 mRNA_6151 0.83 -1.6
126,597 - 14519 mRNA_6151 0.90 -0.5
126,733 - -3.3
126,734 - -0.9
126,744 - -0.8
126,750 + -3.7
126,757 - -0.9
126,868 + -0.7
126,879 + -0.7
127,015 - -2.5
127,040 + -3.8
127,191 + -3.5
127,202 - -1.5
128,021 + 14520 mRNA_6152 0.25 0.7
128,053 - 14520 mRNA_6152 0.26 -2.9
128,199 - 14520 mRNA_6152 0.31 -0.7
128,936 + 14520 mRNA_6152 0.53 0.6
130,249 - -1.3
130,854 + -0.5
130,888 - -2.7
130,889 + -2.1
131,021 + -1.8
131,152 - -1.1
131,169 + -0.1