Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6141

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6141: 14509 - HMMPfam-GGL domain-PF00631,SUPERFAMILY--SSF48670, at 106663 to 106926 14509 mRNA_6142: 14510 - Hypothetical Protein, at 107739 to 108173 14510

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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105,769 - -0.8
105,791 - -2.8
105,801 - -1.5
105,818 + -2.3
105,823 + -1.8
105,825 - -2.5
105,829 - -0.3
105,830 + -2.0
105,839 - 1.8
105,841 - -4.0
105,842 + -2.9
105,850 - -0.6
105,851 + -1.5
105,851 + 1.1
105,858 + 0.3
105,867 - 0.4
105,871 - -3.3
105,882 - -0.6
105,996 + -0.1
106,003 + -0.7
106,080 - -0.9
106,316 - -1.4
106,576 + -0.8
106,722 - 14509 mRNA_6141 0.22 -2.3
106,999 - -0.6
107,009 + -0.2
107,019 + 2.4
107,025 - -1.3
107,029 - 0.0
107,034 - -3.5
107,155 + -1.7
107,166 + -0.6
107,170 + -3.8
107,171 + -0.5
107,175 - -2.0
107,296 - -0.5
107,308 + -0.9
107,310 + -1.9
107,310 - -0.1
107,320 - -2.4
107,332 - -3.3
107,333 - -1.1
107,346 - -0.0
107,359 - -0.8
107,363 + -1.4
107,371 - -0.5
107,372 - -0.1
107,375 - -1.8
107,376 + 0.6
107,390 + -0.3
107,395 + -0.8
107,488 - -0.1
107,507 + -0.7
107,523 - 0.0
107,535 - -0.9
107,535 - -0.2
107,536 + 1.7
107,542 + -1.8
107,559 + -1.0
107,574 - -2.2
107,674 - -0.7
107,691 - -0.7
107,819 - 14510 mRNA_6142 0.18 -0.5