Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6129

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6128: 14496 - BLAST DEHA2B11858p [Debaryomyces hansenii CBS767], at 70896 to 71507 14496 mRNA_6129: 14497 - Hypothetical Protein, at 71681 to 73838 14497 mRNA_6130: 14498 - K11786 STH1_SNF2 ATP-dependent helicase STH1/SNF2, at 73930 to 78529 14498

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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70,720 - 0.1
70,828 + -1.3
70,837 - -0.7
70,846 - 1.3
70,999 + 14496 mRNA_6128 0.17 -1.8
71,031 + 14496 mRNA_6128 0.22 -1.2
71,151 + 14496 mRNA_6128 0.42 -0.4
71,296 + 14496 mRNA_6128 0.65 -0.7
71,420 - 14496 mRNA_6128 0.86 -0.5
71,440 + 14496 mRNA_6128 0.89 1.1
71,443 - 14496 mRNA_6128 0.89 -2.8
71,451 + -1.6
71,470 + -1.6
71,560 + -1.2
71,884 + -0.0
72,444 + 14497 mRNA_6129 0.35 0.1
72,727 + 14497 mRNA_6129 0.48 -2.1
73,080 - 14497 mRNA_6129 0.65 0.8
73,152 - 14497 mRNA_6129 0.68 -2.2
73,165 - 14497 mRNA_6129 0.69 -1.3
73,449 + 14497 mRNA_6129 0.82 0.4
73,588 - 14497 mRNA_6129 0.88 -1.9
73,730 - -3.0
73,752 + -0.5
73,882 + -2.2
73,902 + -3.1
73,902 - -0.2
73,907 - -0.2
73,911 + -0.5
73,915 + -2.3
73,922 + 1.1
73,922 - 1.1