Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6119

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6118: 14486 - K03164 TOP2 DNA topoisomerase II, at 31417 to 38158 14486 mRNA_6119: 14487 - K15280 SLC35C2 solute carrier family 35, member C2, at 38335 to 41391 14487 mRNA_6120: 14488 - K05954 FNTB protein farnesyltransferase subunit beta, at 41541 to 43349 14488

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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37,569 + -1.9
37,968 + -0.7
37,991 - -2.9
38,175 + -0.3
38,190 + -1.4
38,282 - 0.4
38,287 - -2.4
38,342 + -1.8
38,345 - -3.0
38,448 + -1.0
38,489 + -3.0
38,700 - 14487 mRNA_6119 0.12 -1.9
38,738 + 14487 mRNA_6119 0.13 -1.0
38,906 + 14487 mRNA_6119 0.19 -3.0
39,074 + 14487 mRNA_6119 0.24 -1.7
39,195 - 14487 mRNA_6119 0.28 -2.1
39,308 - 14487 mRNA_6119 0.32 -1.7
40,072 - 14487 mRNA_6119 0.57 -1.7
40,621 - 14487 mRNA_6119 0.75 -1.4
40,748 + 14487 mRNA_6119 0.79 -3.1
40,770 - 14487 mRNA_6119 0.80 -2.4
40,776 + 14487 mRNA_6119 0.80 -2.3
41,064 - 14487 mRNA_6119 0.89 -1.6
41,171 - -0.6
41,348 - -1.5
41,392 - -1.4
41,508 - -0.9