Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6116

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6115: 14483 - Hypothetical Protein, at 26459 to 27455 14483 mRNA_6116: 14484 - Hypothetical Protein, at 27856 to 28790 14484 mRNA_6117: 14485 - BLAST expressed protein [Schizophyllum commune H4-8], at 29394 to 30967 14485

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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26,865 + 14483 mRNA_6115 0.41 -1.4
26,871 - 14483 mRNA_6115 0.41 -1.0
26,872 + 14483 mRNA_6115 0.41 -1.3
26,877 - 14483 mRNA_6115 0.42 -1.7
26,898 + 14483 mRNA_6115 0.44 -3.4
26,996 - 14483 mRNA_6115 0.54 -3.3
27,001 - 14483 mRNA_6115 0.54 -0.6
27,004 - 14483 mRNA_6115 0.55 -2.5
27,009 - 14483 mRNA_6115 0.55 -0.8
27,058 - 14483 mRNA_6115 0.60 -1.2
27,134 - 14483 mRNA_6115 0.68 -1.0
27,139 - 14483 mRNA_6115 0.68 -0.6
27,163 - 14483 mRNA_6115 0.71 -0.6
27,219 + 14483 mRNA_6115 0.76 0.5
27,341 - 14483 mRNA_6115 0.88 -1.7
27,346 + 14483 mRNA_6115 0.89 1.5
27,377 + -1.3
27,381 + 0.5
27,511 + -0.1
27,735 - -2.0
27,934 - -0.1
28,046 - 14484 mRNA_6116 0.20 1.0
28,058 - 14484 mRNA_6116 0.22 -2.5
28,064 + 14484 mRNA_6116 0.22 0.1
28,217 + 14484 mRNA_6116 0.39 -0.9
28,231 + 14484 mRNA_6116 0.40 -1.8
28,250 + 14484 mRNA_6116 0.42 -0.0
28,481 + 14484 mRNA_6116 0.67 -1.2
28,671 - 14484 mRNA_6116 0.87 1.2
28,724 + -2.7
28,965 + -1.5
29,023 - -3.2
29,091 + 0.1
29,123 - -2.6
29,142 + 0.8
29,394 - -0.1
29,527 - -1.8
29,785 - 14485 mRNA_6117 0.25 -0.3