Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6112

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479 mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17714 to 19844 14480 mRNA_6113: 14481 - K17263 CAND1 cullin-associated NEDD8-dissociated protein 1, at 19972 to 24805 14481

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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16,719 + 14479 mRNA_6111 0.42 -1.3
16,817 + 14479 mRNA_6111 0.48 -0.2
16,983 - 14479 mRNA_6111 0.59 -2.4
17,034 + 14479 mRNA_6111 0.62 -1.2
17,141 + 14479 mRNA_6111 0.69 -2.3
17,177 - 14479 mRNA_6111 0.71 0.3
17,181 + 14479 mRNA_6111 0.71 -1.7
17,236 + 14479 mRNA_6111 0.75 -2.2
17,259 + 14479 mRNA_6111 0.76 0.0
17,567 + -0.0
17,865 - -0.5
18,020 - 14480 mRNA_6112 0.14 -1.5
18,077 + 14480 mRNA_6112 0.17 -2.0
18,276 + 14480 mRNA_6112 0.26 -2.3
18,462 + 14480 mRNA_6112 0.35 -1.8
18,464 - 14480 mRNA_6112 0.35 0.5
18,586 + 14480 mRNA_6112 0.41 0.6
18,589 - 14480 mRNA_6112 0.41 -1.2
18,596 + 14480 mRNA_6112 0.41 -3.3
18,598 - 14480 mRNA_6112 0.41 -4.3
18,812 + 14480 mRNA_6112 0.52 -3.9
18,864 - 14480 mRNA_6112 0.54 -2.9
19,160 + 14480 mRNA_6112 0.68 -1.9
19,160 + 14480 mRNA_6112 0.68 -0.3
19,242 + 14480 mRNA_6112 0.72 -2.3
19,332 - 14480 mRNA_6112 0.76 -1.6
19,368 + 14480 mRNA_6112 0.78 -1.1
19,396 + 14480 mRNA_6112 0.79 0.2
19,505 + 14480 mRNA_6112 0.84 -2.4
19,511 + 14480 mRNA_6112 0.84 -2.0
19,589 - 14480 mRNA_6112 0.88 0.2
19,615 - 14480 mRNA_6112 0.89 -0.8
19,762 - -3.6
19,763 + -0.7
19,767 - 1.3
19,778 - -4.2
19,789 + 0.4
19,796 + -0.1
19,916 - 0.3
19,922 + -2.9
19,926 + -0.7
19,930 + -1.8
19,932 + -0.6
19,946 + -1.9
20,080 + -0.5
20,205 - -1.0
20,470 + 14481 mRNA_6113 0.10 -2.3
20,606 - 14481 mRNA_6113 0.13 -1.8
20,828 - 14481 mRNA_6113 0.18 -0.8