Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6096

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6095: 14463 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 1636949 to 1643604 14463 mRNA_6096: 14464 - K05721 FGD2 FYVE, RhoGEF and PH domain containing 2, at 1644523 to 1649566 14464 mRNA_6097: 14465 - KOG4313 Thiamine pyrophosphokinase, at 1649855 to 1650926 14465

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
1,643,840 - -1.5
1,643,898 + -1.0
1,644,079 - -0.9
1,644,079 + -2.1
1,644,310 - -3.6
1,644,314 + -2.5
1,644,334 + 0.2
1,644,468 + -0.1
1,644,485 + 0.1
1,644,619 - -1.3
1,644,642 + -1.7
1,644,677 - -1.3
1,644,762 + -0.6
1,645,213 + 14464 mRNA_6096 0.14 -1.1
1,645,362 - 14464 mRNA_6096 0.17 -3.0
1,645,414 - 14464 mRNA_6096 0.18 -1.1
1,645,482 - 14464 mRNA_6096 0.19 -2.5
1,645,738 - 14464 mRNA_6096 0.24 -2.9
1,645,823 + 14464 mRNA_6096 0.26 -1.2
1,645,944 - 14464 mRNA_6096 0.28 -1.3
1,646,098 - 14464 mRNA_6096 0.31 0.7
1,646,221 + 14464 mRNA_6096 0.34 0.0
1,646,232 - 14464 mRNA_6096 0.34 0.1
1,646,406 - 14464 mRNA_6096 0.37 0.4
1,646,415 + 14464 mRNA_6096 0.38 -1.0
1,646,578 + 14464 mRNA_6096 0.41 0.0
1,646,812 + 14464 mRNA_6096 0.45 0.8
1,646,814 + 14464 mRNA_6096 0.45 -3.7
1,646,821 + 14464 mRNA_6096 0.46 -2.1
1,646,906 - 14464 mRNA_6096 0.47 0.3
1,646,906 - 14464 mRNA_6096 0.47 -1.9
1,646,933 + 14464 mRNA_6096 0.48 0.3
1,647,403 - 14464 mRNA_6096 0.57 -1.4
1,647,620 - 14464 mRNA_6096 0.61 -0.9
1,647,689 + 14464 mRNA_6096 0.63 -0.6
1,647,855 - 14464 mRNA_6096 0.66 -2.1
1,648,213 + 14464 mRNA_6096 0.73 -1.3
1,648,260 - 14464 mRNA_6096 0.74 -0.3
1,648,386 + 14464 mRNA_6096 0.77 -1.6
1,648,396 - 14464 mRNA_6096 0.77 -0.3
1,648,439 - 14464 mRNA_6096 0.78 -2.9
1,648,469 - 14464 mRNA_6096 0.78 -2.7
1,648,510 - 14464 mRNA_6096 0.79 1.7
1,648,647 - 14464 mRNA_6096 0.82 0.0
1,648,744 + 14464 mRNA_6096 0.84 -1.9
1,648,747 - 14464 mRNA_6096 0.84 1.9
1,648,863 + 14464 mRNA_6096 0.86 -2.2
1,648,926 + 14464 mRNA_6096 0.87 -1.7
1,649,007 - 14464 mRNA_6096 0.89 1.3
1,649,062 - -1.5
1,649,071 - -2.3
1,649,100 + -1.8
1,649,251 - -1.3
1,649,267 + -1.5
1,649,405 + -2.9
1,649,410 - -3.5
1,649,460 + -2.8
1,649,578 + 0.6
1,649,656 - -0.4
1,649,656 - -1.5
1,649,663 - -2.9
1,649,726 - -1.4
1,649,738 - -1.4
1,649,835 + -2.4
1,649,848 + -0.5
1,649,999 - 14465 mRNA_6097 0.13 -0.1
1,650,071 + 14465 mRNA_6097 0.20 -2.6
1,650,072 + 14465 mRNA_6097 0.20 -1.3
1,650,163 + 14465 mRNA_6097 0.29 -2.1
1,650,173 - 14465 mRNA_6097 0.30 0.6
1,650,187 + 14465 mRNA_6097 0.31 -0.1
1,650,277 + 14465 mRNA_6097 0.39 -3.7
1,650,428 + 14465 mRNA_6097 0.53 0.6
1,650,478 + 14465 mRNA_6097 0.58 -1.1